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STM32CubeMX Changes my Debug Port to JTAG

Question asked by sparky.marky on May 28, 2014
Latest reply on Jun 20, 2014 by denehan.joe
I am using the STM32F4 Discovery board with the Debug Port set to SW for the ST-Link debugger. Development is in stages, so I run STM32CubeMX to set a peripheral, debug the resulting code, then pull in another peripheral, lather, rinse, repeat.  Every time I run CubeMX it resets the Debug port to JTAG. Is there a setting I missed -OR- is this a bug?